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32 lines
907 B
Python
32 lines
907 B
Python
from unittest import TestCase
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import libs.seqalign as sq
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class TestFastaMap(TestCase):
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def test_sequence_align(self):
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"""
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Use https://n9.cl/2qcq to
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check the distance.
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"""
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seq1 = "AATCG"
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seq2 = "AACG"
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expected = 2
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self.assertEqual(expected, sq.compare_samples(seq1, seq2))
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seq1 = "JDSLFA"
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seq2 = "JALFDSA"
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expected = 6
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self.assertEqual(expected, sq.compare_samples(seq1, seq2))
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seq1 = "DSAJKJFHJAKHDIOUZVJCXMVCZIOIUOWUQRIEUWQIPIDSFSDKZXV"
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seq2 = "FKSJAFKJIOTIGHLKJVMCXXZCMVLJASIRUWQOIUTPQWURIIPOQ"
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expected = 46
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self.assertEqual(expected, sq.compare_samples(seq1, seq2))
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seq1 = "KFDSKAJFJPOTIPWQUIMXZMVMZXBVM"
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seq2 = "FKDSPOIQTUITYSKZMV"
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expected = 31
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self.assertEqual(expected, sq.compare_samples(seq1, seq2))
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