jasterv/sarscov-hierarchy
1
0
Fork 0
mirror of https://codeberg.org/JasterV/sarscov-hierarchy.git synced 2026-04-26 18:10:08 +00:00
Code Issues Projects Releases Packages Wiki Activity Actions
No description
188 commits 3 branches 0 tags 73 MiB
Python 71.7%
Rust 28.3%
Find a file
Víctor Martínez 46d94443c6
Update lib.rs
2020-11-10 01:46:58 +01:00
resources resources added 2020-05-22 17:57:12 +02:00
src Update lib.rs 2020-11-10 01:46:58 +01:00
test resources added 2020-05-22 17:57:12 +02:00
.gitignore some refactors 2020-05-21 02:57:30 +02:00
INFORME.md some changes 2020-05-24 17:04:45 +02:00
LICENSE Initial commit 2020-04-22 17:35:42 +02:00
README.md Update README.md 2020-08-07 02:20:58 +02:00
requeriments.txt some changes 2020-05-24 17:04:45 +02:00

README.md

Welcome to the Sarscov Hierarchy Project 👋

All Contributors

The goal of this project is to read and analize RNA sequences of the Sars-Covid-2 virus around the world and build a hierarchy tree implementing a hierarchical clustering algorithm

🏠 Homepage

Install Dependencies

pip install -r requeriments.txt 📝

✨ Execute

You must install the sequences.fasta and sequences.csv files from the NCBI official database to execute this project.

We provide you a .zip file with 2 other fasta and csv files to try out without downloading anything so, have fun!

python src/main/sarscovhierarchy.py <data_path>

Full Code Documentation

Python Code Documentation

Rust Code Documentation

👤 Contributors ✨


Manu Martin
💻
Victor Martínez
💻

Show your support

Give us a ⭐️ if you like this project!